Class MetaOntologizer


  • public class MetaOntologizer
    extends java.lang.Object
    • Constructor Summary

      Constructors 
      Constructor Description
      MetaOntologizer()  
    • Method Summary

      All Methods Static Methods Concrete Methods 
      Modifier and Type Method Description
      static void reformat​(java.io.File ontologizer_outdir, java.lang.String result_file_prefix, java.io.File domain_gain_loss_file, java.lang.String outfile_base, java.io.File obo_file, double p_adjusted_upper_limit, java.lang.String comment, java.util.List<PfamToGoMapping> pfam_to_go)  
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • MetaOntologizer

        public MetaOntologizer()
    • Method Detail

      • reformat

        public static void reformat​(java.io.File ontologizer_outdir,
                                    java.lang.String result_file_prefix,
                                    java.io.File domain_gain_loss_file,
                                    java.lang.String outfile_base,
                                    java.io.File obo_file,
                                    double p_adjusted_upper_limit,
                                    java.lang.String comment,
                                    java.util.List<PfamToGoMapping> pfam_to_go)
                             throws java.io.IOException
        Throws:
        java.io.IOException